@tixotih659
Can't say I started the thread without a preliminary investigation.
Seems like the whole pool of Ubi's current games is broken in the achievements/trophies department, besides the issue is not new too.
Google took me to the reddit posts of 4 to 5+ years ago about their games with this particular issue lol.
Well, I think I will ditch the game without completing post-campaign Bagley memories missions, since I play for achievemnts too, as it gives some direction to fully experience games' mechanics, and now I feel like I'm lost in a middle of nowhere with a stained and teared up paper map.

Hi, what do you mean by "uploaded save file to cloud"?
I'm playing on my console, always connected to the internet, and i have no idea where the save file is. It should be in the cloud too i guess?
I had a short chat with ubisoft support on facebook, I also pointed out that some mid-game main story achievemnets are missing for me too:
"When Good Men Do Nothing - Complete the Albion Storyline" - this one is missing, while i have "divided we fall" which pops AFTER the one mentioned.
They received the info but didn't provide me a ticket No or something for the issue tracking.

Well, the subject speaks for itslef.
I have read the older forum thread and the issues seem to be unresolved since the day 1 of the game launch.
For instance, I've completed all boroughs, ubisoft connect lists only 2 - no achievement for all boroughs.
What do?